6. FAQS
Note
For technical assistance or bug report, please reach us out via GitHub (https://github.com/pendy05/DiveR). For the general correspondence, please email Dr. Asif M. Khan (asif@perdanauniversity.edu.my, makhan@bezmialem.edu.tr).
What can I do if the elements in the plot appear to be overlapping each other due to the displayed plot size?
You may want to increase the height and/or width of the plot offered in the download option, based on your need before downloading the plot.
Where can I get the source code of these R plots if I would like to modify the code based on my need?
You may visit this GitHub repository (https://github.com/pendy05/DiveR) to get the corresponding source codes.
What is the maximum image size (in inches) that can be downloaded via vDiveR R Shiny App deployed on Shiny server?
Maximum 50 (H) x50 (W) inches to prevent the common error of specifying dimensions in pixels encountered in R ggsave() function.
I encountered ‘Error in x$clone: attempt to apply non-function’ in plot ‘entropy and incidence of total variants’ when I submit files for two hosts. Other plots work fine though. Why does this happen?
vDiveR expects the proteins with same protein name have same length (number of positions) across both the hosts to carry out the comparison plot.
What should I do if I would like to run each function in vDiveR separately and locally?
vDiveR will be soon released as a Bioconductor package. Tentatively, you may visit our GitHub repository (https://github.com/pendy05/DiveR) for its source code.